EXTRA Assignment 6 [Coding]: Vector Field Decomposition and Design (Due 5/14)

Note: This assignment is NOT required! However, you can complete it for up to 15% extra credit. Or, you can do this one instead of some of the other assignments. Overall, you just need to be sure you completed A0 and A1, as well as 3 of the assignments A2–A6 (your choice which ones). Also, you cannot use late days on this assignment since it’s the last one.

Please implement the following routines in:

  1. projects/vector-field-decomposition/tree-cotree.js:
    1. buildPrimalSpanningTree
    2. inPrimalSpanningTree
    3. buildDualSpanningCotree
    4. inDualSpanningCotree
    5. buildGenerators
  2. projects/vector-field-decomposition/harmonic-bases.js:
    1. buildClosedPrimalOneForm
    2. compute

In addition, please implement either Hodge Decomposition, or Trivial Connections (on surfaces of genus 0):

Hodge Decomposition: Please implement the following routines in

  1. projects/vector-field-decomposition/hodge-decomposition.js:
    1. constructor
    2. computeExactComponent
    3. computeCoExactComponent
    4. computeHarmonicComponent

Trivial Connections on Surfaces of Genus 0: Please implement computeConnections in projects/direction-field-design/trivial-connections.js. This file has function signatures for trivial connections on arbitrary surfaces, but for this assignment we are only requiring you to compute the connection form on simply-connected surfaces where you don’t have to worry about the period matrix. You are, of course, welcome to implement the general algorithm if you would like to!

Notes:

  • I made some changes to the tests for this assignment, and to the trivial connections viewer. You should update the following files before starting the assignment:
    • tests/vector-field-decomposition/test.html
    • tests/vector-field-decomposition/test.js
    • tests/direction-field-design/sphere.js
    • tests/direction-field-design/test.html
    • tests/direction-field-design/test.js
    • projects/direction-field-design/index.html
  • Recall that homology generators are a set of loops which somehow describe all of the interesting loops on a surface. For example, here are the two homology generators for the torus.
  • Your buildGenerators function should implement the Tree-Cotree algorithm, which is Algorithm 5 of section 8.2 of the notes.
  • In tree-cotree.js the trees are stored using the dictionaries vertexParent and faceParent. You should store the primal spanning tree by storing the parent of vertex v in vertexParent[v]. The root should be its own parent. Similarly, you should store the dual spanning cotree by storing the parent of face f in faceParent[f].
  • The Tree Cotree algorithm finds homology generators on the dual mesh. That is to say, you should take each dual edge which is not in either spanning tree, and form a loop by following its endpoint back up the dual cotree until they meet at the root of the dual cotree. Even though we’re thinking of these homology generators as loops on the dual mesh, we still store them as lists of ordinary halfedges, since edges in the dual mesh are in 1-1 correspondence with edges in the primal graph.
  • buildClosedPrimalOneForm should use a homology generator to construct a closed primal 1-form as described in section 8.22 of the notes.
  • The compute function in HarmonicBases should compute a harmonic basis using Algorithm 6 in section 8.2 of the notes. If you choose to implement Hodge decomposition for the assignment, you are welcome to use your Hodge decomposition code to solve for $d\alpha$. Otherwise, you can just ignore the hodgeDecomposition parameter and directly solve the linear system $\Delta \alpha = \delta \omega$ to find $\alpha$. (Recall that $\delta$ is the codifferential, which we talked a lot about in the Discrete Exterior Calculus assignment).

Notes (Hodge Decomposition):

  • The procedure for Hodge Decomposition is given as Algorithm 3 in section 8.1 of the Notes.
  • Note that the SparseMatrix class has an invertDiagonal function that you can use to invert diagonal matrices.
  • For computeCoExactComponent, you should compute the coexact component $\delta \beta$ of a differential form $\omega$ by solving the equation $d\delta \beta = d\omega$. As stated in the notes, the most convenient way of doing this is to define a dual 0-form $\tilde \beta := *\beta$, and then to solve $d*d \tilde \beta = d \omega$. Then you can compute $\delta \beta$ using the fact that $\delta \beta = *d*\beta = *d\tilde\beta$. When doing these computations, you should keep tract of whether your forms are primal forms or dual forms, recalling that hodge stars take you from primal forms to dual forms, and hodge star inverses take you from dual forms to primal forms. (THis is discussed in detail in section 8.1.3 of the notes.
  • Note that the 2-form Laplacian B is not necessarily positive definite, so you should use an LU solver instead of a Cholesky solver when solving systems involving B.

Notes (Trivial Connections):

  • The trivial-connection-js file is structured for implementing the full trivial connections algorithm on arbitrary surfaces. Since that’s tricky, we’re only requiring that you compute connections on topological spheres. You should implement this in the computeConnections() function, and it should pass the tests labeled “computeConnections on a sphere”.
  • Even though we’re working with spheres, it is still helpful to use the formulation of Trivial connections given in section 8.4.1 of the notes. In particular, you should solve the optimization problem given in Exercise 8.21.
  • On a sphere, there are no harmonic 1-forms, so the $\gamma$ part of your Hodge decomposition will always be 0. Furthermore, the sphere has no homology generators, so the problem simplifies to \[\min_{\delta \beta} \;\|\delta\beta\|^2\;\text{s.t.}\; d\delta\beta = u\]
  • Following the notes, we observe that the constraint $d\delta\beta = u$ determines $\beta$ up to a constant, and that constant is annihilated by $\delta$. So you can find the connection 1-form $\delta \beta$ with a single linear solve.

Submission Instructions
Please rename all js files you edited to be txt files and put them in a single zip file called solution.zip. This file and your solution to the written exercises should be submitted together in a single email to Geometry.Collective@gmail.com with the subject line DDG19A6.

Warning: You cannot use late days on this assignment since it’s the last one.

3 thoughts on “EXTRA Assignment 6 [Coding]: Vector Field Decomposition and Design (Due 5/14)”

  1. In the course notes, the Tree-Cotree algorithm is implemented by building a spanning tree of dual edges, and then building a spanning tree of primal edges that do not cross dual edges in T* – but in our codebase we do the opposite. Does this order matter, and should we be building generators for the primal mesh instead?

    1. Great question—I believe that this only matters in the case where the surface has boundary. Here, if I remember correctly, building the dual tree first will automatically give you the boundary loops as generators, whereas if you build the primal tree first you have to extract these loops explicitly. (But it’s been a while since I thought about it, and I may have the order reversed!)

      Anyway, for your present assignment it shouldn’t matter which way you do it.

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